The detailed information of tRNA gene sequence


Sequence ID>C08001971
Genome IDCP001043
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia phymatum STM815 [CP001043, CP001044]
Start position on genome 134688
End posion on genome 134760
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gtctcgtcgt
tRNA gene sequence 
GGGGCGGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCGGGAGTTCGATC
CTCCTCCGCCCACtcg
Downstream region at tRNA end position 
cgcccgtcag
Secondary structure (Cloverleaf model)
>C08001971	Ala	CGC
                   t      Ctcg cgcccgtcag
                     G   A
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C T
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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