The detailed information of tRNA gene sequence


Sequence ID>C08011129
Genome IDAP009510
Search identical group
Phylum/ClassElusimicrobiota
SpeciesCandidatus Endomicrobium trichonymphae Rs-D17 genomovar Ri2008 [AP009510]
Start position on genome 1091609
End posion on genome 1091535
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttatattct
tRNA gene sequence 
GCTGCCATCGTCTAGCGGTTCAGGACATCGCCCTCTCAAGGCGGAGATCACGGGTTCAAA
TCCCGTTGGCAGCGCtt
Downstream region at tRNA end position 
tactttatat
Secondary structure (Cloverleaf model)
>C08011129	Glu	CTC
                   t      GCtt tactttatat
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T C A        A     AGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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