The detailed information of tRNA gene sequence


Sequence ID>C08011145
Genome IDAP009510
Search identical group
Phylum/ClassElusimicrobiota
SpeciesCandidatus Endomicrobium trichonymphae Rs-D17 genomovar Ri2008 [AP009510]
Start position on genome 533139
End posion on genome 533054
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agatctttaa
tRNA gene sequence 
GCCGGGGTGGTGGAATTGGCAGACACGTGAGACTCAAAATCTCAAGTTGCTTAGGCGGCG
TGCGGGTTCAAGTCCCGCCCTCGGCAtta
Downstream region at tRNA end position 
atataaattt
Secondary structure (Cloverleaf model)
>C08011145	Leu	CAA
                   a      Atta atataaattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     AGTTGCTTAGGCGGCGT
                    T - A
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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