The detailed information of tRNA gene sequence


Sequence ID>C08011111
Genome IDAP009510
Search identical group
Phylum/ClassElusimicrobiota
SpeciesCandidatus Endomicrobium trichonymphae Rs-D17 genomovar Ri2008 [AP009510]
Start position on genome 34638
End posion on genome 34727
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgctgata
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCGATAGTCTTGAAAACTATTATAGGGGAAACTCTA
TCGGGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gacgattcca
Secondary structure (Cloverleaf model)
>C08011111	Ser	TGA
                   a      GCCA gacgattcca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATAGGGGAAACTCTATC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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