The detailed information of tRNA gene sequence


Sequence ID>C08001966
Genome IDCP001053
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia phytofirmans PsJN [CP001052, CP001053]
Start position on genome 3107750
End posion on genome 3107666
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttttttctt
tRNA gene sequence 
GGGCCGGACGCCGTGCTGGTTGCAGGCAGCGGACTCATAATCCGCCTCCGAAAGGACATC
GTCGGTTCGAATCCGACCCGGCCCAcca
Downstream region at tRNA end position 
ttgatgcaaa
Secondary structure (Cloverleaf model)
>C08001966	Met	CAT
                   t      Acca ttgatgcaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    A     C A G C C     A
    T C G T        C      | | | | |     G
  G         G C C G       G T C G G     C
  G           | | |                 T T
  T         A G G C
    T G C          A     CTCCGAAAGGACATC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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