The detailed information of tRNA gene sequence


Sequence ID>C08007140
Genome IDAP008981
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Ikeda [AP008981]
Start position on genome 231311
End posion on genome 231225
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aatgattcag
tRNA gene sequence 
GCGGTTGTGGCGGAATCGGTAGACGCGCAGCATTGAGGGTGCTGTTCTTGTTAATCTGGA
GTGGAAGTTCAAGTCTTCTCAGCCGCAcca
Downstream region at tRNA end position 
tttcttatct
Secondary structure (Cloverleaf model)
>C08007140	Leu	GAG
                   g      Acca tttcttatct
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     A
    C       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTTGTTAATCTGGAGT
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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