The detailed information of tRNA gene sequence


Sequence ID>C08007141
Genome IDAP008981
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Ikeda [AP008981]
Start position on genome 166996
End posion on genome 166914
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agtattaatt
tRNA gene sequence 
GCCTTTGTGGTGGAATGGTAGACACAACAGATTCAAAATCTGTCGCTCATAAAAGCGTGC
TGGTTCAAGTCCAGTCAAGGGCAcca
Downstream region at tRNA end position 
actgttttat
Secondary structure (Cloverleaf model)
>C08007141	Leu	CAA
                   t      Acca actgttttat
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T A A        G      + | | | |     A
    G       G G T G       G C T G G     C
    G         | | |                 T T
    T       A C A C
      A G          A     CGCTCATAAAAGCGT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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