The detailed information of tRNA gene sequence


Sequence ID>C08007123
Genome IDAP008981
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Ikeda [AP008981]
Start position on genome 1047844
End posion on genome 1047919
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agcaaatata
tRNA gene sequence 
GCCGATATAGCTCAGTTGGTAGAGCAGCATATTCGTAATATGCAGGTCAGGGGTTCAACT
CCCTTTATCGGCACCG
Downstream region at tRNA end position 
caatatcttt
Secondary structure (Cloverleaf model)
>C08007123	Thr	CGT
                   a      ACCG caatatcttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     T T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    A - T
                    T - A
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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