The detailed information of tRNA gene sequence


Sequence ID>C08006561
Genome IDCP000975
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesMethylacidiphilum infernorum V4 [CP000975]
Start position on genome 1902519
End posion on genome 1902430
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggattttcgt
tRNA gene sequence 
GGACAGGTGGCTCGAGAGGATGAAGGCACTCGACTCGAAATCGAGAATGGGGCTAAAACC
CCATCGCGGGTTCGAATCCCGCCCTGTCCGcca
Downstream region at tRNA end position 
tccccttctt
Secondary structure (Cloverleaf model)
>C08006561	Ser	CGA
                   t      Gcca tccccttctt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    A G A G        G      | | | | |     G
  G         C T C G       G C G G G     C
  G           + | |                 T T
  A         A G G C
    T G A          A     AATGGGGCTAAAACCCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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