The detailed information of tRNA gene sequence


Sequence ID>C08006564
Genome IDCP000975
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesMethylacidiphilum infernorum V4 [CP000975]
Start position on genome 1418796
End posion on genome 1418708
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcttttttat
tRNA gene sequence 
GGACAGATGCCGGAGTGGTTGATCGGGGCGGTCTTGAAAACCGCTAGGGAGTGACCCTCC
CTCGTGGGTTCGAATCCCACTCTGTCCGCtt
Downstream region at tRNA end position 
attttggcgg
Secondary structure (Cloverleaf model)
>C08006564	Ser	TGA
                   t      GCtt attttggcgg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TAGGGAGTGACCCTCCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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