The detailed information of tRNA gene sequence


Sequence ID>C08005308
Genome IDCP001089
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesTrichlorobacter lovleyi SZ [CP001089]
Start position on genome 3344004
End posion on genome 3344101
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tacagtacca
tRNA gene sequence 
GGAGGTACGTCGGGCGCTGGTGGCCCGCGCGGTCTTCAAAACCGTTGAGAGGGGTGAGAA
ACTCCTTTGGCAGGTTCGATTCCTGTGTACCTCCGCCA
Downstream region at tRNA end position 
tacacaaaaa
Secondary structure (Cloverleaf model)
>C08005308	SeC	TCA
                   a      GCCA tacacaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G          T T
                    G     T G T C C     A
      C G C        T      + | | | |     G
    T       G G G C       G C A G G     C
    G       | | | |                 T T
    G       C C C G
      T G G        C     TGAGAGGGGTGAGAAACTCCTTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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