The detailed information of tRNA gene sequence


Sequence ID>C08011414
Genome IDAM999887
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
Start position on genome 1070592
End posion on genome 1070520
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agcaagaatt
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGTAGAGCATCTGTTTTGCACGCAGAAGGTCAGCGGTTCGATC
CCGCTTGCCTCCAcca
Downstream region at tRNA end position 
atataggttc
Secondary structure (Cloverleaf model)
>C08011414	Ala	TGC
                   t      Acca atataggttc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T + G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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