The detailed information of tRNA gene sequence


Sequence ID>C08011410
Genome IDAM999887
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
Start position on genome 1251966
End posion on genome 1252037
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cctccattgt
tRNA gene sequence 
GCGGGTATAGCTCAATGGTAGAGCTCTAGCCTTCCAAGCTAGTGACGTGGGTTCGATTCC
CACTATCCGCTCtt
Downstream region at tRNA end position 
ttttttgttg
Secondary structure (Cloverleaf model)
>C08011410	Gly	TCC
                   t      TCtt ttttttgttg
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T          T T
                    T     C A C C C     A
        A A        A      | | | | |     G
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     TGAC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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