The detailed information of tRNA gene sequence


Sequence ID>C08011400
Genome IDAM999887
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
Start position on genome 779031
End posion on genome 779118
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaataagtat
tRNA gene sequence 
GGAAAGGTGGCTGAGCGGTCTAAAGCACACGCTTGGAAAGCGTGCACATATGAAAATATG
TCGGGGGTTCGAATCCCCCCTTTTCCGCac
Downstream region at tRNA end position 
attatttcta
Secondary structure (Cloverleaf model)
>C08011400	Ser	GGA
                   t      GCac attatttcta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        A     CACATATGAAAATATGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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