The detailed information of tRNA gene sequence


Sequence ID>C08011406
Genome IDAM999887
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesWolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
Start position on genome 1076933
End posion on genome 1077018
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaaagaggt
tRNA gene sequence 
GGACGGATGGCCGAGCGGTTTAAGGCACCAGTCTTGAAAACTGACGTACGGAAACGTACC
ATGGGTTCGAATCCCATTCCGTCCGCac
Downstream region at tRNA end position 
ttacttctca
Secondary structure (Cloverleaf model)
>C08011406	Ser	TGA
                   t      GCac ttacttctca
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTACGGAAACGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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