The detailed information of tRNA gene sequence


Sequence ID>C08003826
Genome IDCP001100
Search identical group
Phylum/ClassChlorobiota
SpeciesChloroherpeton thalassium ATCC 35110 [CP001100]
Start position on genome 1405107
End posion on genome 1405015
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatccgaaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAACCGTCATAGGGTGTTTAGCT
CTATCGGGGGTTCGAATCCCCCCCTCTCCGCAA
Downstream region at tRNA end position 
aaatgcaaaa
Secondary structure (Cloverleaf model)
>C08003826	Ser	GCT
                   a      GCAA aaatgcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATAGGGTGTTTAGCTCTATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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