The detailed information of tRNA gene sequence


Sequence ID>C08003827
Genome IDCP001100
Search identical group
Phylum/ClassChlorobiota
SpeciesChloroherpeton thalassium ATCC 35110 [CP001100]
Start position on genome 1152167
End posion on genome 1152093
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tccttttatg
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCGCTACCTTGACACGGTAGAGGTCAGAAGTTCGAA
TCTTCTATCGCCCACtc
Downstream region at tRNA end position 
atttttccca
Secondary structure (Cloverleaf model)
>C08003827	Val	GAC
                   g      ACtc atttttccca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          T A
                    T     T C T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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