The detailed information of tRNA gene sequence


Sequence ID>C08011231
Genome IDCP001139
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAliivibrio fischeri MJ11 [CP001133, CP001139]
Start position on genome 1774557
End posion on genome 1774474
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gaaattgcgt
tRNA gene sequence 
GCCCTGGTGGTGGAATTGGTAGACACAAGGGATTTAAAATCCCTCGGCGTTCGCGCTGTG
CCGGTTCAAGTCCGGCCCGGGGCAcca
Downstream region at tRNA end position 
tctattagct
Secondary structure (Cloverleaf model)
>C08011231	Leu	TAA
                   t      Acca tctattagct
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCGTTCGCGCTGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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