The detailed information of tRNA gene sequence


Sequence ID>C08011242
Genome IDCP001139
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAliivibrio fischeri MJ11 [CP001133, CP001139]
Start position on genome 821252
End posion on genome 821171
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
caatatttgt
tRNA gene sequence 
GCGGACGTGGCGGAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCGCGAGGTGTGAG
AGTTCAAGTCTCTCCGTCCGCAcca
Downstream region at tRNA end position 
ttatttagat
Secondary structure (Cloverleaf model)
>C08011242	Leu	TAG
                   t      Acca ttatttagat
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCGAGGTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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