The detailed information of tRNA gene sequence


Sequence ID>C08011248
Genome IDCP001139
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAliivibrio fischeri MJ11 [CP001133, CP001139]
Start position on genome 820536
End posion on genome 820463
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaattgaat
tRNA gene sequence 
GGCTACTTAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCAAA
TCCCGTAGTAGCCAcca
Downstream region at tRNA end position 
ttctttccct
Secondary structure (Cloverleaf model)
>C08011248	Met	CAT
                   t      Acca ttctttccct
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A          T A
                    T     T G C C C     A
      C G A        A      | |   | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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