The detailed information of tRNA gene sequence


Sequence ID>C08000420
Genome IDCP001132
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 53993 [CP001132]
Start position on genome 2669504
End posion on genome 2669432
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cccaccaaat
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCACCGGTTCGAGA
CCGGTCAGCTCCAcca
Downstream region at tRNA end position 
cagggataga
Secondary structure (Cloverleaf model)
>C08000420	Ala	TGC
                   t      Acca cagggataga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          A G
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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