The detailed information of tRNA gene sequence


Sequence ID>C08000428
Genome IDCP001132
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 53993 [CP001132]
Start position on genome 1949205
End posion on genome 1949122
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttggtatttt
tRNA gene sequence 
GCCGGGATGGCGGAACTGGTAGACGCGCCGGACTCAAAATCCGGTGGTGGTGACATCGTG
TCGGTTCGAGTCCGACTCTCGGTAcca
Downstream region at tRNA end position 
ttatttaagt
Secondary structure (Cloverleaf model)
>C08000428	Leu	CAA
                   t      Acca ttatttaagt
                     G + T
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C
                     A - T          T G
                    T     C A G C C     A
      C A A        G      | | | | |     G
    T       G G C G       G T C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTGGTGACATCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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