The detailed information of tRNA gene sequence


Sequence ID>C08000391
Genome IDCP001132
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 53993 [CP001132]
Start position on genome 85796
End posion on genome 85871
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cagggtcttt
tRNA gene sequence 
GGGGATGTAGCTCAGTCGGTAGAGCAGCGGCCTTTTAAGCCGTGGGTCGCGGGTTCGAAT
CCCGCCGTCCCCACCA
Downstream region at tRNA end position 
aataaaacag
Secondary structure (Cloverleaf model)
>C08000391	Lys	TTT
                   t      ACCA aataaaacag
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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