The detailed information of tRNA gene sequence


Sequence ID>C08000397
Genome IDCP001132
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 53993 [CP001132]
Start position on genome 511528
End posion on genome 511604
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgaccctgt
tRNA gene sequence 
TGCGGGGTGGAGCAGCCAGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
agattcgtag
Secondary structure (Cloverleaf model)
>C08000397	Met	CAT
                   t      ACCA agattcgtag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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