The detailed information of tRNA gene sequence


Sequence ID>C08000427
Genome IDCP001132
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 53993 [CP001132]
Start position on genome 1966336
End posion on genome 1966263
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgttcttca
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCCACGGTTCGAG
TCCGTGCGGGCCCAcca
Downstream region at tRNA end position 
attaaaacga
Secondary structure (Cloverleaf model)
>C08000427	Met	CAT
                   a      Acca attaaaacga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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