The detailed information of tRNA gene sequence


Sequence ID>CL08000003
Genome IDCP000958
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia orbicola MC0-3 [CP000958, CP000959, CP000960]
Start position on genome 1329901
End posion on genome 1330234
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccgccctctt
tRNA gene sequence 
GCCGGGGTGATGAAATTGGTAAACATAGCGGACTTAAAATCCGCCGCCTTAACTGGCTTG
CCGGTTCGAGTCCGGTCCCCGGCACCt
Downstream region at tRNA end position 
cgattgcgtt
Secondary structure (Cloverleaf model)
>CL08000003	Leu	TAA
                   t      ACCt cgattgcgtt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G G C C     A
      T A A        G      + | | | |     G
    T       A G T A       G C C G G     C
    G         | | |                 T T
    G       A C A T
      T A A        A     CGCCTTAACTGGCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=247 (in A-loop)
AAACGATTGAGTGCCCGGCCGGAAACGGTCGGTGCAGAACCCTTCAAATTCGGCGAAACCCCTGATGCGC
GCATCGAGGCAACGCCGAGCCAAGCCTCGCGGCATCCGCGAGGAAGGTGTAGAGACTAGACGGGGGGCGC
CTAAGGCGCACGGGCAGCGGTCACGCCCGCGCGCGACGGTGAAGGCATAGTCCAGCGCACGAACGGTTCG
CGCACGCGACGCCGGCTTTGAAAGAAGCAGTGTGACG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK