The detailed information of tRNA gene sequence


Sequence ID>CL08000008
Genome IDCP000747
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPhenylobacterium zucineum HLK1 [CP000747]
Start position on genome 1223347
End posion on genome 1223664
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ggcgcgccgT
tRNA gene sequence 
GCGGGCGTGGCGAAATTGGTAGACGCAACGGACTTAAAATCCGTAGGGCCGCAAGGCTCG
TGCCGGTTCGACCCCGGCCGCCCGCACCA
Downstream region at tRNA end position 
ccgtctccgt
Secondary structure (Cloverleaf model)
>CL08000008	Leu	TAA
                   T      ACCA ccgtctccgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     AGGGCCGCAAGGCTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=227 (in A-loop)
GAACTGACGCTTGAGTGCGCCGGGGGAAACCCCGGACGTAGAACCGCTCAAATTCGGGGAACCCTGTCAG
ATGGCGATCCCGAGCCAAGCCCTGCGCGGCCACGCCGCGTTGGGAAGGTGTAGAGACTAGACGGGCGGCG
CCTACGGCCAGCTGGCCAGGGCGAAGGGATAGTCCAGACCACGAACGCCGACGCACCGTCGGCGGCGGCG
AAAGCCGAAGTGGTACG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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