The detailed information of tRNA gene sequence


Sequence ID>W141349996
Genome IDJCKE01000042
Search identical group
Phylum/ClassCampylobacterota
SpeciesHelicobacter pylori wls-5-1 [JCKE]
Start position on genome 39562
End posion on genome 39485
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattgcttgt
tRNA gene sequence 
GTCAAGGTAGCTCAGCTGGTTTAGAGCGCTGGTCTCATAAGCCGGAGGTCGGGGGTTCAA
GTCCCCCTCTTGACACCA
Downstream region at tRNA end position 
tgatttgatt
Secondary structure (Cloverleaf model)
>W141349996	Met	CAT
                   t      ACCA tgatttgatt
                     G - C
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C C C C C     A
    T C G A        A      | | | | |     A
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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