The detailed information of tRNA gene sequence


Sequence ID>ENV08000063
Genome IDABLU01114674
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 20
End posion on genome 109
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatgtcgcga
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGCGTGTAGGCGGGAAACCGTC
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ccnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000063	Ser	GGA
                   a      GCCA ccnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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