The detailed information of tRNA gene sequence


Sequence ID>ENV08000471
Genome IDABMD01132363
Search identical group
Phylum/Classviral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands)
Species
Start position on genome 11
End posion on genome 100
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatgtaatta
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCGCACGCTTGGAGAGCGTGTATAGGGGCAACTCTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaaaattcgt
Secondary structure (Cloverleaf model)
>ENV08000471	Ser	GGA
                   a      GCCA aaaaattcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATAGGGGCAACTCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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