The detailed information of tRNA gene sequence


Sequence ID>ENV08000474
Genome IDABMD01134965
Search identical group
Phylum/Classviral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Christmas Atoll (Kirtimati; Northern Line Islands)
Species
Start position on genome 81
End posion on genome 6
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agctctatat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGCTGAGGGTTCGAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
tttagnnnnn
Secondary structure (Cloverleaf model)
>ENV08000474	Trp	CCA
                   t      GCCA tttagnnnnn
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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