The detailed information of tRNA gene sequence


Sequence ID>WENV183679428
Genome IDORMF010061860
Search identical group
Phylum/Class[ORMF] groundwater metagenome; groundwater
Species
Start position on genome 7
End posion on genome 83
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnagtcac
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
acgcaaggcc
Secondary structure (Cloverleaf model)
>WENV183679428	fMet	CAT
                   c      ACCA acgcaaggcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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