The detailed information of tRNA gene sequence


Sequence ID>WENV183683207
Genome IDORMF010547676
Search identical group
Phylum/Class[ORMF] groundwater metagenome; groundwater
Species
Start position on genome 1235
End posion on genome 1138
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taatcggccc
tRNA gene sequence 
GGAAGTGAGTAGGGTCCGGTGACTCTCCTGGCCTTCAAAGCCTGTGGGGCGTCGGGGAAC
CGGCGTTCGGTGGGTTCGACTCCCACGCACTTCCGCCA
Downstream region at tRNA end position 
ttcccaaacg
Secondary structure (Cloverleaf model)
>WENV183683207	SeC	TCA
                   c      GCCA ttcccaaacg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     A   G          T C
                    G     C A C C C     A
      C C T        T      | | | | |     G
    G       G G G A       G T G G G     C
    G       | + | |                 T T
    T       C T C T
      G A          C     TGGGGCGTCGGGGAACCGGCGTTCG
                    C - G
                    T   T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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