The detailed information of tRNA gene sequence


Sequence ID>ENV08000547
Genome IDABMF01034363
Search identical group
Phylum/Classsaltern metagenome; viral fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 43
End posion on genome 118
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctatcccctc
tRNA gene sequence 
GGCCCGTTAGCTTAGTGGTTAAAGCGCCTGTCTGTCGAACAGGAGATCGTCGGTTCGAGC
CCGATACGGGTCGCCA
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000547	Asp	GTC
                   c      GCCA cnnnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          C G
                    T     T A G C C     A
      T G A        A      + | | | |     G
    G       T T C G       G T C G G     C
    G       | | | |                 T T
    T       A A G C
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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