The detailed information of tRNA gene sequence


Sequence ID>ENV08000560
Genome IDABMF01067689
Search identical group
Phylum/Classsaltern metagenome; viral fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 23
End posion on genome 99
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacaaagtt
tRNA gene sequence 
GGACCTATAGCTCAGTTGGTTAGAGCAGTGAACTCATAATTCATTGGCCCCTGGTTCGAG
TCCAGGTGGGTCCACCA
Downstream region at tRNA end position 
aacttattca
Secondary structure (Cloverleaf model)
>ENV08000560	Met	CAT
                   t      ACCA aacttattca
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGCC
                    G + T
                    T - A
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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