The detailed information of tRNA gene sequence


Sequence ID>ENV08000583
Genome IDABMF01112289
Search identical group
Phylum/Classsaltern metagenome; viral fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 87
End posion on genome 12
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cccacttcgt
tRNA gene sequence 
GCCGACATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGAGTTCGACT
CTTGGTGTCGGCACCA
Downstream region at tRNA end position 
tttattttaa
Secondary structure (Cloverleaf model)
>ENV08000583	Thr	TGT
                   t      ACCA tttattttaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T C
                    T     G G T T C     A
      T G A        A      | | + | |     G
    T       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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