The detailed information of tRNA gene sequence


Sequence ID>WENV183700643
Genome IDPDMW01067325
Search identical group
Phylum/Class[PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density
Species
Start position on genome 853
End posion on genome 943
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taagttgcgt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGCCAAAAGCGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCCA
Downstream region at tRNA end position 
aaagcttact
Secondary structure (Cloverleaf model)
>WENV183700643	Ser	GGA
                   t      GCCA aaagcttact
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGCCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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