The detailed information of tRNA gene sequence


Sequence ID>WENV183700836
Genome IDPDMW01136312
Search identical group
Phylum/Class[PDMW] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated, low buoyant density
Species
Start position on genome 1713
End posion on genome 1637
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gggacactaa
tRNA gene sequence 
GGACCCATAGCATAATTGGTTGATGCAACCGCCTCATAAGCGGAAGATTCTCAGTTCGAG
TCTGAGTGGGTCTACCA
Downstream region at tRNA end position 
ctttttagtt
Secondary structure (Cloverleaf model)
>WENV183700836	Ile2	CAT
                   a      ACCA ctttttagtt
                     G + T
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A G T C     A
      T A A        A      | | | | |     G
    T       T A C G       C T C A G     C
    G       | | | |                 T T
    G       A T G C
      T T G        A     AGATT
                    A   A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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