The detailed information of tRNA gene sequence


Sequence ID>WENV183701375
Genome IDPDMX01004063
Search identical group
Phylum/Class[PDMX] marine metagenome; viruses from water sample; < 0.22 micron filtered, nuclease treated
Species
Start position on genome 417
End posion on genome 506
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggcattcaC
tRNA gene sequence 
GGAGGATTGGCTGAGTGGTCGAAAGCAACAGTTTGCTAAATTGTCGAAGGTGTAAATCTT
CCGTTGGTTCGAATCCAACATCCTCCGTCt
Downstream region at tRNA end position 
tgcctttgta
Secondary structure (Cloverleaf model)
>WENV183701375	Ser	GCT
                   C      GTCt tgcctttgta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C A A C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T T G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGAAGGTGTAAATCTTCC
                    A - T
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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