The detailed information of tRNA gene sequence


Sequence ID>ENV08000712
Genome IDABMI01009272
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 36
End posion on genome 111
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcgctttgct
tRNA gene sequence 
GTCCCGTTCGTCTAGCCAGGTCTAGGACACNGGGTTTTCATCCCAGCAACAGGGGTTCGA
ATCCCCTACGGGACGCtg
Downstream region at tRNA end position 
cccgcgctan
Secondary structure (Cloverleaf model)
>ENV08000712	Glu	TTC
                   t      GCtg cccgcgctan
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     G
  A         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     CAAC
                    C - G
                    N   A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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