The detailed information of tRNA gene sequence


Sequence ID>WENV183702866
Genome IDPDVJ01000482
Search identical group
Phylum/Class[PDVJ] alkali sediment metagenome; glacial lake sediment
Species
Start position on genome 9965
End posion on genome 9879
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atggagcanT
tRNA gene sequence 
GCCGGGGTAGTCTAGTCCGGGAAGGCGGTAGCCTTGAAAGCTACTGGTGCCCTGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGTaa
Downstream region at tRNA end position 
nnaaacnttt
Secondary structure (Cloverleaf model)
>WENV183702866	Ser	TGA
                   T      GTaa nnaaacnttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGCCCTGCACCTC
                    G - C
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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