The detailed information of tRNA gene sequence


Sequence ID>WENV183703103
Genome IDPDVJ01002954
Search identical group
Phylum/Class[PDVJ] alkali sediment metagenome; glacial lake sediment
Species
Start position on genome 2881
End posion on genome 2796
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacgcttttT
tRNA gene sequence 
GCTGAGGTAGTCTAGCGGTAGGGCGCAGGCCTGGAAAGCCTGTGGTGCGAAAGTGCCTCG
GGGGTTCAATTCCCCCCCTCAGCGTtt
Downstream region at tRNA end position 
tattgtttta
Secondary structure (Cloverleaf model)
>WENV183703103	Ser	GGA
                   T      GTtt tattgtttta
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C C C C C     A
        G A        A      | | | | |     A
      C     T C T G       G G G G G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGTGCGAAAGTGCCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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