The detailed information of tRNA gene sequence


Sequence ID>ENV08000726
Genome IDABMI01025400
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 92
End posion on genome 19
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
tatcgcgggt
tRNA gene sequence
GGGCCTTTAGCTCAGTTGGTAGAGCGCCACGTTTACACCGTGGATGTCATCGGTTCGAGC
CCGGTAGGGCCCACgc
Downstream region at tRNA end position
gcagaaatta
Secondary structure (Cloverleaf model)
>ENV08000726	Val	TAC
                   t      ACgc gcagaaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C G
                    T     T G G C C     A
      T G A        A      | + | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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