The detailed information of tRNA gene sequence


Sequence ID>ENV08000730
Genome IDABMI01027743
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 33
End posion on genome 109
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aataatttac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAC
TCCGATATTCTCCNCAA
Downstream region at tRNA end position 
aaaagnnnnn
Secondary structure (Cloverleaf model)
>ENV08000730	Ala	TGC
                   c      NCAA aaaagnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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