The detailed information of tRNA gene sequence


Sequence ID>ENV08000732
Genome IDABMI01029480
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 77
End posion on genome 1
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcgcagtttt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCCACGTTTACACCGTGGATGCCGGGGGTTCGAG
TCCCTCCGGGCCCACCG
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000732	Val	TAC
                   t      ACCG nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ATGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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