The detailed information of tRNA gene sequence


Sequence ID>ENV08000733
Genome IDABMI01030132
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 6
End posion on genome 82
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
nnnnnaacgc
tRNA gene sequence 
GCACCCATAGCTCAGCTGGATAGAGTGTCGCCCTCCGAAGGCGAAGGTCGTAGGTTCGAA
TCCTACTGGGTGCGCCA
Downstream region at tRNA end position 
cttcctctcc
Secondary structure (Cloverleaf model)
>ENV08000733	Arg	CCG
                   c      GCCA cttcctctcc
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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