The detailed information of tRNA gene sequence


Sequence ID>ENV08000757
Genome IDABMI01079853
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 23
End posion on genome 98
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
tcaatcattt
tRNA gene sequence
AGGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT
CCTGTCCGCCCTGCAA
Downstream region at tRNA end position
gggaaggnnn
Secondary structure (Cloverleaf model)
>ENV08000757	Trp	CCA
                   t      GCAA gggaaggnnn
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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