The detailed information of tRNA gene sequence


Sequence ID>ENV08000758
Genome IDABMI01082154
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 100
End posion on genome 25
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnncgcaa
tRNA gene sequence 
AGGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT
CCTGTCCGCCCTGCGA
Downstream region at tRNA end position 
cgaactgtca
Secondary structure (Cloverleaf model)
>ENV08000758	Trp	CCA
                   a      GCGA cgaactgtca
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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