The detailed information of tRNA gene sequence


Sequence ID>ENV08000781
Genome IDABMI01186575
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 17
End posion on genome 89
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gtgagagcat
tRNA gene sequence 
GCGGATGTGGCGCAGCGGTAGCGCATCACCTTGCCAAGGTGAGGGTCGCGAGTTCGAATC
TCGTCATCCGCTCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08000781	Gly	GCC
                   t      TCnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G C T C     A
        G A        G      + | | | |     G
      C     C G C G       G C G A G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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