The detailed information of tRNA gene sequence


Sequence ID>WENV183716812
Genome IDPDWJ01000207
Search identical group
Phylum/Class[PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J
Species
Start position on genome 8092
End posion on genome 8168
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgtaaagagc
tRNA gene sequence 
GGGGTCGTAGCTCAGCTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCAAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttcacgttcg
Secondary structure (Cloverleaf model)
>WENV183716812	Asp	GTC
                   c      GCCA ttcacgttcg
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      C G A        A      + | | | |     A
    T       C T C G       G C G A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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